Ken-Ichi Miyazono : rechercher sur Z-Library

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1

Expression, high-pressure refolding, purification, crystallization and preliminary X-ray analysis of a novel single-strand-specific 3′–5′ exonuclease PhoExo I from Pyrococcus horikoshii OT3

Miyazono, Ken-ichi, Tsutsumi, Kanae, Ishino, Yoshizumi, Tanokura, Masaru

Journal:

Acta Crystallographica Section F Structural Biology Communications

Année:

2014

Langue:

english

Fichier:

PDF, 265 KB

english, 2014

2

Crystal structure and structural stability of acylphosphatase from hyperthermophilic archaeon Pyrococcus horikoshii OT3

Ken-ichi Miyazono, Yoriko Sawano, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2005

Langue:

english

Fichier:

PDF, 699 KB

english, 2005

3

Crystal structure of the YjgF/YER057c/UK114 family protein from the hyperthermophilic archaeon Sulfolobus tokodaii strain 7

Takuya Miyakawa, Woo Cheol Lee, Ken-ichi Hatano, Yusuke Kato, Yoriko Sawano, Ken-ichi Miyazono, Koji Nagata, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2006

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2006

4

Crystal structure of an archaeal homologue of multidrug resistance repressor protein, EmrR, from hyperthermophilic archaea Sulfolobus tokodaii strain 7

Ken-ichi Miyazono, Masanari Tsujimura, Yutaka Kawarabayasi, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2007

Langue:

english

Fichier:

PDF, 616 KB

english, 2007

5

Crystal structure of thioredoxin domain of ST2123 from thermophilic archaea Sulfolobus tokodaii strain7

Hua Ming, Yusuke Kato, Ken-ichi Miyazono, Kosuke Ito, Masayuki Kamo, Koji Nagata, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2007

Langue:

english

Fichier:

PDF, 402 KB

english, 2007

6

A unique catalytic triad revealed by the crystal structure of APE0912, a short-chain dehydrogenase/reductase family protein from Aeropyrum pernix K1

Akihiro Yamamura, Takefumi Ichimura, Futa Mimoto, Jun Ohtsuka, Ken-Ichi Miyazono, Masahiko Okai, Masayuki Kamo, Woo-Cheol Lee, Koji Nagata, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 514 KB

english, 2008

7

Crystal structure of STS042, a stand-alone RAM module protein, from hyperthermophilic archaeon Sulfolobus tokodaii strain7

Ken-ichi Miyazono, Masanari Tsujimura, Yutaka Kawarabayasi, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 315 KB

english, 2008

8

Crystal structure of hypothetical protein PH0734.1 from hyperthermophilic archaea Pyrococcus horikoshii OT3

Ken-ichi Miyazono, Yozo Nishimura, Yoriko Sawano, Tsukasa Makino, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 186 KB

english, 2008

9

Crystal structure of the DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3

Ken-ichi Miyazono, Michio Shirokane, Yoriko Sawano, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 769 KB

english, 2009

10

Crystal structure of KaiC-like protein PH0186 from hyperthermophilic archaea Pyrococcus horikoshii OT3

Hee-Jin Kang, Keiko Kubota, Hua Ming, Ken-ichi Miyazono, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 337 KB

english, 2009

11

Crystal structure of ginkbilobin-2 with homology to the extracellular domain of plant cysteine-rich receptor-like kinases

Takuya Miyakawa, Ken-ichi Miyazono, Yoriko Sawano, Ken-ichi Hatano, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 224 KB

english, 2009

12

Crystal structure of curcuminoid synthase CUS from Oryza sativa

Ken-ichi Miyazono, Jounghyun Um, Fabiana Lica Imai, Yohei Katsuyama, Yasuo Ohnishi, Sueharu Horinouchi, Masaru Tanokura

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 429 KB

english, 2011

13

Cooperative DNA-binding and sequence-recognition mechanism of aristaless and clawless

Miyazono, Ken-ichi, Zhi, Yuehua, Takamura, Yuriko, Nagata, Koji, Saigo, Kaoru, Kojima, Tetsuya, Tanokura, Masaru

Journal:

The EMBO Journal

Année:

2010

Langue:

english

Fichier:

PDF, 2.12 MB

english, 2010

14

Structural basis of abscisic acid signalling

Miyazono, Ken-ichi, Miyakawa, Takuya, Sawano, Yoriko, Kubota, Keiko, Kang, Hee-Jin, Asano, Atsuko, Miyauchi, Yumiko, Takahashi, Mihoko, Zhi, Yuehua, Fujita, Yasunari

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 1.14 MB

english, 2009

15

Improvement in Quality of Protein Crystals Grown in a High Magnetic Field Gradient

Nakamura, Akira, Ohtsuka, Jun, Miyazono, Ken-ichi, Yamamura, Akihiro, Kubota, Keiko, Hirose, Ryoichi, Hirota, Noriyuki, Ataka, Mitsuo, Sawano, Yoriko, Tanokura, Masaru

Journal:

Crystal Growth & Design

Année:

2012

Langue:

english

Fichier:

PDF, 2.38 MB

english, 2012

16

The Crystal Structure of l-Sorbose Reductase from Gluconobacter frateurii Complexed with NADPH and l-Sorbose

Keiko Kubota, Koji Nagata, Masahiko Okai, Ken-ichi Miyazono, Wichai Soemphol, Jun Ohtsuka, Akihiro Yamamura, Natsaran Saichana, Hirohide Toyama, Kazunobu Matsushita, Masaru Tanokura

Journal:

Journal of Molecular Biology

Année:

2011

Langue:

english

Fichier:

PDF, 1.47 MB

english, 2011

17

High pressure refolding, purification, and crystallization of flavin reductase from Sulfolobus tokodaii strain 7

Masahiko Okai, Jun Ohtsuka, Atsuko Asano, Linjun Guo, Takuya Miyakawa, Ken-ichi Miyazono, Akira Nakamura, Akitoshi Okada, Hai Zheng, Kenzo Kimura, Koji Nagata, Masaru Tanokura

Journal:

Protein Expression and Purification

Année:

2012

Langue:

english

Fichier:

PDF, 509 KB

english, 2012

18

TGF-β suppresses POEM expression through ERK1/2 and JNK in osteoblasts

Agasa Miyazono, Atsushi Yamada, Naoko Morimura, Masamichi Takami, Dai Suzuki, Makoto Kobayashi, Ken-ichi Tezuka, Matsuo Yamamoto, Ryutaro Kamijo

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 261 KB

english, 2007

19

Molecular Mechanism of Distinct Salt-Dependent Enzyme Activity of Two Halophilic Nucleoside Diphosphate Kinases

Yamamura, Akihiro, Ichimura, Takefumi, Kamekura, Masahiro, Mizuki, Toru, Usami, Ron, Makino, Tsukasa, Ohtsuka, Jun, Miyazono, Ken-ichi, Okai, Masahiko, Nagata, Koji, Tanokura, Masaru

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 1.29 MB

english, 2009

20

Structural Basis for the Coordinated Processive Movement of Kinesin-1 studied by Structural and Single Molecule Analyses

Makino, Tsukasa, Mori, Teppei, Kanada, Ryo, Miyazono, Ken-ichi, Takada, Shoji, Tanokura, Masaru, Tomishige, Michio

Journal:

Biophysical Journal

Année:

2011

Langue:

english

Fichier:

PDF, 49 KB

english, 2011

21

A sequence-specific DNA glycosylase mediates restriction-modification in Pyrococcus abyssi

Miyazono, Ken-ichi, Furuta, Yoshikazu, Watanabe-Matsui, Miki, Miyakawa, Takuya, Ito, Tomoko, Kobayashi, Ichizo, Tanokura, Masaru

Journal:

Nature Communications

Année:

2014

Langue:

english

Fichier:

PDF, 1.41 MB

english, 2014

22

Crystal Structure of Nucleotide-free Kinesin-1 Motor Domain Explains Coordinated Walking Mechanism

Makino, Tsukasa, Mori, Teppei, Miyazono, Ken-ichi, Tanokura, Masaru, Tomishige, Michio

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 89 KB

english, 2009

23

Structural basis for substrate recognition and processive cleavage mechanisms of the trimeric exonuclease PhoExo I

Miyazono, Ken-ichi, Ishino, Sonoko, Tsutsumi, Kanae, Ito, Tomoko, Ishino, Yoshizumi, Tanokura, Masaru

Journal:

Nucleic Acids Research

Année:

2015

Langue:

english

Fichier:

PDF, 8.35 MB

english, 2015

24

Arabidopsis DREB2A-Interacting Proteins Function as RING E3 Ligases and Negatively Regulate Plant Drought Stress: Responsive Gene Expression

Feng Qin, Yoh Sakuma, Lam-Son Phan Tran, Kyonoshin Maruyama, Satoshi Kidokoro, Yasunari Fujita, Miki Fujita, Taishi Umezawa, Yoriko Sawano, Ken-ichi Miyazono, Masaru Tanokura, Kazuo Shinozaki and Kazu

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 3.13 MB

english, 2008

25

Structural basis of stereospecific reduction by quinuclidinone reductase

Takeshita, Daijiro, Kataoka, Michihiko, Miyakawa, Takuya, Miyazono, Ken-ichi, Kumashiro, Shoko, Nagai, Takahiro, Urano, Nobuyuki, Uzura, Atsuko, Nagata, Koji, Shimizu, Sakayu, Tanokura, Masaru

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.75 MB

english, 2014

26

Crystal structure of acylphosphatase from hyperthermophilic archaeon Pyrococcus horikoshii OT3

MIYAZONO, Ken-ichi, SAWANO, Yoriko, TANOKURA, Masaru

Journal:

Proceedings of the Japan Academy Series B Physical and Biological Sciences

Année:

2004

Langue:

english

Fichier:

PDF, 596 KB

english, 2004

27

Tetrameric structure of the restriction DNA glycosylase R.PabI in complex with nonspecific double-stranded DNA

Wang, Delong, Miyazono, Ken-ichi, Tanokura, Masaru

Journal:

Scientific Reports

Année:

2016

Langue:

english

Fichier:

PDF, 1.48 MB

english, 2016

28

Insight into the transition between the open and closed conformations of Thermus thermophilus carboxypeptidase

Okai, Masahiko, Yamamura, Akihiro, Hayakawa, Kou, Tsutsui, Shiho, Miyazono, Ken-ichi, Lee, Woo-Cheol, Nagata, Koji, Inoue, Yumiko, Tanokura, Masaru

Journal:

Biochemical and Biophysical Research Communications

Année:

2017

Langue:

english

Fichier:

PDF, 1.83 MB

english, 2017

29

Degenerate Sequence Recognition by AdpA

Ohtsuka, Jun, Yao, Ming Dong, Nagata, Koji, Miyazono, Ken-ichi, Zhi, Yuehua, Ohnishi, Yasuo, Tanokura, Masaru

Journal:

Acta Crystallographica Section A Foundations and Advances

Année:

2014

Langue:

english

Fichier:

PDF, 595 KB

english, 2014

30

1TP4-06 Crystal Structure of Nucleotide-free Kinesin-1 Motor Domain Explains Coordinated Walking Mechanism(The 47th Annual Meeting of the Biophysical Society of Japan)

Makino, Tsukasa, Mori, Teppei, Miyazono, Ken-ichi, Tanokura, Masaru, Tomishige, Michio

Journal:

Seibutsu Butsuri

Année:

2009

Langue:

english

Fichier:

PDF, 244 KB

english, 2009

31

1P046 1YA1045 Structural basis of abscisic acid signaling(Protein:Structure & Function,Early Research in Biophysics Award Candidate Presentations,Early Research in Biophysics Award,The 48th Annual Meeting of the Biophysical Society of Japan)

Miyakawa, Takuya, Miyazono, Ken-ichi, Sawano, Yoriko, Kubota, Keiko, Tanokura, Masaru

Journal:

Seibutsu Butsuri

Année:

2010

Langue:

english

Fichier:

PDF, 231 KB

english, 2010

32

10.1271/kagakutoseibutsu.47.486

MIYAZONO, Ken-ichi, TANOKURA, Masaru

Journal:

KAGAKU TO SEIBUTSU

Année:

2009

Fichier:

PDF, 1.20 MB

2009

33

3P-028 X-ray structural analysis of N-terminal domain of KaiC (KaiCI) for understanding of restrained ATPase activity(Protein:Structure & Function,The 47th Annual Meeting of the Biophysical Society of Japan)

Son, Se-Young, Kang, Hee-Jin, Miyazono, Ken-ichi, Tanokura, Masaru, Watanabe, Nobuhisa, Kondo, Takao, Akiyama, Shuji

Journal:

Seibutsu Butsuri

Année:

2009

Langue:

english

Fichier:

PDF, 240 KB

english, 2009

34

1P-146 Crystal Structure of Nucleotide-free Kinesin-1 Motor Domain Explains Coordinated Walking Mechanism(Molecular motor, The 47th Annual Meeting of the Biophysical Society of Japan)

Makino, Tsukasa, Mori, Teppei, Miyazono, Ken-ichi, Tanokura, Masaru, Tomishige, Michio

Journal:

Seibutsu Butsuri

Année:

2009

Fichier:

PDF, 188 KB

2009

35

2P030 The crystal structure of L-sorbose reductase from Gluconobacter frateurii complexed with NADPH and L-sorbose(The 48th Annual Meeting of the Biophysical Society of Japan)

Kubota, Keiko, Nagata, Koji, Okai, Masahiko, Miyazono, Ken-ichi, Soemphol, Wichai, Ohtsuka, Jun, Yamamura, Akihiro, Toyama, Hirohide, Matsushita, Kazunobu, Tanokura, Masaru

Journal:

Seibutsu Butsuri

Année:

2010

Langue:

english

Fichier:

PDF, 238 KB

english, 2010

36

Structural basis for receptor-regulated SMAD recognition by MAN1

Miyazono, Ken-ichi, Ohno, Yosuke, Wada, Hikaru, Ito, Tomoko, Fukatsu, Yui, Kurisaki, Akira, Asashima, Makoto, Tanokura, Masaru

Journal:

Nucleic Acids Research

Année:

2018

Langue:

english

Fichier:

PDF, 6.58 MB

english, 2018

37

Distortion of double-stranded DNA structure by the binding of the restriction DNA glycosylase R.PabI

Miyazono, Ken-ichi, Wang, Delong, Ito, Tomoko, Tanokura, Masaru

Journal:

Nucleic Acids Research

Année:

2020

Fichier:

PDF, 8.92 MB

2020